DataFormats»Cytoscape

Cytoscape

Cytoscape is a Java-based open-source bioinformatics software platform for visualizing molecular interaction networks and integrating these interactions with gene expression profiles and other state data. UI is built with Piccolo

Has plugin architecture for adding features, formats, layouts

Main Site:

http://www.cytoscape.org/

Authors:

Coalition of organizations. http://www.cytoscape.org/people.php

Input Formats:

Documentation:

http://www.cytoscape.org/manual/Cytoscape2_3Manual.pdf

Support:

two mailing lists: http://www.cytoscape.org/community.php